CDS

Accession Number TCMCG057C22285
gbkey CDS
Protein Id XP_018432732.1
Location 182078..182989
Gene LOC108805239
GeneID 108805239
Organism Raphanus sativus

Protein

Length 303aa
Molecule type protein
Topology linear
Data_file_division PLN
dblink BioProject:PRJNA344915
db_source XM_018577230.1
Definition PREDICTED: protein transport protein SEC13 homolog A [Raphanus sativus]

EGGNOG-MAPPER Annotation

COG_category U
Description Belongs to the WD repeat SEC13 family
KEGG_TC -
KEGG_Module M00404        [VIEW IN KEGG]
M00427        [VIEW IN KEGG]
KEGG_Reaction -
KEGG_rclass -
BRITE ko00000        [VIEW IN KEGG]
ko00001        [VIEW IN KEGG]
ko00002        [VIEW IN KEGG]
ko03019        [VIEW IN KEGG]
ko04131        [VIEW IN KEGG]
KEGG_ko ko:K14004        [VIEW IN KEGG]
EC -
KEGG_Pathway ko03013        [VIEW IN KEGG]
ko04141        [VIEW IN KEGG]
ko04150        [VIEW IN KEGG]
map03013        [VIEW IN KEGG]
map04141        [VIEW IN KEGG]
map04150        [VIEW IN KEGG]
GOs GO:0000323        [VIEW IN EMBL-EBI]
GO:0002376        [VIEW IN EMBL-EBI]
GO:0002474        [VIEW IN EMBL-EBI]
GO:0002478        [VIEW IN EMBL-EBI]
GO:0002495        [VIEW IN EMBL-EBI]
GO:0002504        [VIEW IN EMBL-EBI]
GO:0003674        [VIEW IN EMBL-EBI]
GO:0005488        [VIEW IN EMBL-EBI]
GO:0005515        [VIEW IN EMBL-EBI]
GO:0005575        [VIEW IN EMBL-EBI]
GO:0005622        [VIEW IN EMBL-EBI]
GO:0005623        [VIEW IN EMBL-EBI]
GO:0005634        [VIEW IN EMBL-EBI]
GO:0005635        [VIEW IN EMBL-EBI]
GO:0005643        [VIEW IN EMBL-EBI]
GO:0005654        [VIEW IN EMBL-EBI]
GO:0005730        [VIEW IN EMBL-EBI]
GO:0005737        [VIEW IN EMBL-EBI]
GO:0005764        [VIEW IN EMBL-EBI]
GO:0005765        [VIEW IN EMBL-EBI]
GO:0005773        [VIEW IN EMBL-EBI]
GO:0005774        [VIEW IN EMBL-EBI]
GO:0005783        [VIEW IN EMBL-EBI]
GO:0005789        [VIEW IN EMBL-EBI]
GO:0005798        [VIEW IN EMBL-EBI]
GO:0005829        [VIEW IN EMBL-EBI]
GO:0006810        [VIEW IN EMBL-EBI]
GO:0006886        [VIEW IN EMBL-EBI]
GO:0006888        [VIEW IN EMBL-EBI]
GO:0006900        [VIEW IN EMBL-EBI]
GO:0006901        [VIEW IN EMBL-EBI]
GO:0006903        [VIEW IN EMBL-EBI]
GO:0006996        [VIEW IN EMBL-EBI]
GO:0008104        [VIEW IN EMBL-EBI]
GO:0008150        [VIEW IN EMBL-EBI]
GO:0009966        [VIEW IN EMBL-EBI]
GO:0009967        [VIEW IN EMBL-EBI]
GO:0009987        [VIEW IN EMBL-EBI]
GO:0010646        [VIEW IN EMBL-EBI]
GO:0010647        [VIEW IN EMBL-EBI]
GO:0012505        [VIEW IN EMBL-EBI]
GO:0012506        [VIEW IN EMBL-EBI]
GO:0012507        [VIEW IN EMBL-EBI]
GO:0015031        [VIEW IN EMBL-EBI]
GO:0015833        [VIEW IN EMBL-EBI]
GO:0016020        [VIEW IN EMBL-EBI]
GO:0016043        [VIEW IN EMBL-EBI]
GO:0016050        [VIEW IN EMBL-EBI]
GO:0016192        [VIEW IN EMBL-EBI]
GO:0019882        [VIEW IN EMBL-EBI]
GO:0019884        [VIEW IN EMBL-EBI]
GO:0019886        [VIEW IN EMBL-EBI]
GO:0022607        [VIEW IN EMBL-EBI]
GO:0023051        [VIEW IN EMBL-EBI]
GO:0023056        [VIEW IN EMBL-EBI]
GO:0030117        [VIEW IN EMBL-EBI]
GO:0030120        [VIEW IN EMBL-EBI]
GO:0030127        [VIEW IN EMBL-EBI]
GO:0030133        [VIEW IN EMBL-EBI]
GO:0030134        [VIEW IN EMBL-EBI]
GO:0030135        [VIEW IN EMBL-EBI]
GO:0030658        [VIEW IN EMBL-EBI]
GO:0030659        [VIEW IN EMBL-EBI]
GO:0030660        [VIEW IN EMBL-EBI]
GO:0030662        [VIEW IN EMBL-EBI]
GO:0031080        [VIEW IN EMBL-EBI]
GO:0031090        [VIEW IN EMBL-EBI]
GO:0031410        [VIEW IN EMBL-EBI]
GO:0031967        [VIEW IN EMBL-EBI]
GO:0031974        [VIEW IN EMBL-EBI]
GO:0031975        [VIEW IN EMBL-EBI]
GO:0031981        [VIEW IN EMBL-EBI]
GO:0031982        [VIEW IN EMBL-EBI]
GO:0031984        [VIEW IN EMBL-EBI]
GO:0032006        [VIEW IN EMBL-EBI]
GO:0032008        [VIEW IN EMBL-EBI]
GO:0032991        [VIEW IN EMBL-EBI]
GO:0033036        [VIEW IN EMBL-EBI]
GO:0034613        [VIEW IN EMBL-EBI]
GO:0034622        [VIEW IN EMBL-EBI]
GO:0035459        [VIEW IN EMBL-EBI]
GO:0035859        [VIEW IN EMBL-EBI]
GO:0042175        [VIEW IN EMBL-EBI]
GO:0042802        [VIEW IN EMBL-EBI]
GO:0042886        [VIEW IN EMBL-EBI]
GO:0043226        [VIEW IN EMBL-EBI]
GO:0043227        [VIEW IN EMBL-EBI]
GO:0043228        [VIEW IN EMBL-EBI]
GO:0043229        [VIEW IN EMBL-EBI]
GO:0043231        [VIEW IN EMBL-EBI]
GO:0043232        [VIEW IN EMBL-EBI]
GO:0043233        [VIEW IN EMBL-EBI]
GO:0043933        [VIEW IN EMBL-EBI]
GO:0044085        [VIEW IN EMBL-EBI]
GO:0044422        [VIEW IN EMBL-EBI]
GO:0044424        [VIEW IN EMBL-EBI]
GO:0044425        [VIEW IN EMBL-EBI]
GO:0044428        [VIEW IN EMBL-EBI]
GO:0044432        [VIEW IN EMBL-EBI]
GO:0044433        [VIEW IN EMBL-EBI]
GO:0044437        [VIEW IN EMBL-EBI]
GO:0044444        [VIEW IN EMBL-EBI]
GO:0044446        [VIEW IN EMBL-EBI]
GO:0044464        [VIEW IN EMBL-EBI]
GO:0045184        [VIEW IN EMBL-EBI]
GO:0046907        [VIEW IN EMBL-EBI]
GO:0048002        [VIEW IN EMBL-EBI]
GO:0048193        [VIEW IN EMBL-EBI]
GO:0048194        [VIEW IN EMBL-EBI]
GO:0048199        [VIEW IN EMBL-EBI]
GO:0048207        [VIEW IN EMBL-EBI]
GO:0048208        [VIEW IN EMBL-EBI]
GO:0048475        [VIEW IN EMBL-EBI]
GO:0048518        [VIEW IN EMBL-EBI]
GO:0048522        [VIEW IN EMBL-EBI]
GO:0048583        [VIEW IN EMBL-EBI]
GO:0048584        [VIEW IN EMBL-EBI]
GO:0050789        [VIEW IN EMBL-EBI]
GO:0050794        [VIEW IN EMBL-EBI]
GO:0051179        [VIEW IN EMBL-EBI]
GO:0051234        [VIEW IN EMBL-EBI]
GO:0051640        [VIEW IN EMBL-EBI]
GO:0051641        [VIEW IN EMBL-EBI]
GO:0051648        [VIEW IN EMBL-EBI]
GO:0051649        [VIEW IN EMBL-EBI]
GO:0051650        [VIEW IN EMBL-EBI]
GO:0051656        [VIEW IN EMBL-EBI]
GO:0051668        [VIEW IN EMBL-EBI]
GO:0061024        [VIEW IN EMBL-EBI]
GO:0061700        [VIEW IN EMBL-EBI]
GO:0065003        [VIEW IN EMBL-EBI]
GO:0065007        [VIEW IN EMBL-EBI]
GO:0070013        [VIEW IN EMBL-EBI]
GO:0070727        [VIEW IN EMBL-EBI]
GO:0071702        [VIEW IN EMBL-EBI]
GO:0071705        [VIEW IN EMBL-EBI]
GO:0071840        [VIEW IN EMBL-EBI]
GO:0090110        [VIEW IN EMBL-EBI]
GO:0090114        [VIEW IN EMBL-EBI]
GO:0097708        [VIEW IN EMBL-EBI]
GO:0098588        [VIEW IN EMBL-EBI]
GO:0098796        [VIEW IN EMBL-EBI]
GO:0098805        [VIEW IN EMBL-EBI]
GO:0098827        [VIEW IN EMBL-EBI]
GO:0098852        [VIEW IN EMBL-EBI]
GO:1902531        [VIEW IN EMBL-EBI]
GO:1902533        [VIEW IN EMBL-EBI]

Sequence

CDS:  
ATGCCTCCACAGAAGATCGAGACTGGTCACAGCGACATTGTCCATGATGTCGTCATGGATTACTATGGAAAGCGTGTAGCTACTGCCTCATCAGACTGCACCGTCAAGATAACCGGAGTAAGCAACAGCGGCGGATCGCAGCAGCTAGCTACCTTAACCGGCCACCGAGGTCCCGTCTGGCAAGTCGCTTGGGCCCACCCAAAGTTCGATTCGCTACTGGCTTCGTGCTCTTACGATGGGCAGATCATAATATGGAAAGAAGGAAACAACCAAAACGAATGGACGCAGGCTCACGTCTTCAACGACCACAAAGTATCAGTCAACTCCATCGCTTGGGCTCCTCACGAGCTCGGACTCTCCTTGGCTTGCGGAGCATCCGATGGAAACATTTCTGTTTTCTCAGCGAGAGCAGATGGCGGTTGGGACACAACGAGGATAGACCAAGCGCATCCGGTTGGAGTCACCTCAGTGTCATGGGCACCAGCGACGGAGCCAGGTGCGCTCGTTAGCTCCGGTATGCACGAACCGGTTTATAAATTAGCGTCGGGAGGGTGTGATAGTACGGTGAAGGTGTGGAAATTCGCCAACGGGTCGTGGAAGATGGACTGTTTCCCGGCGCTTCACAAGCACAAGGATTGGGTGAGGGACGTGGCATGGGCACCTAACCTGGGACTGCCGAAGTCGACGATAGCAAGCGGGTCGGAAGATGGGAGTGTGATCATATGGACGGTAGGGAAAGAAGGAGAGCAGTGGGAAGGAAAGGTTTTGAAAGATTTCAAGACGCCCGTGTGGAGGGTGACCTGGTCGTTGACTGGTAATCTGCTGGCTGTTTCGGATGGGAACAATAACGTAACGTTGTGGAAAGAGGCTGTGGATGGGGAGTGGGAGCAAGTCACTGTCGTTGAGCCATAG
Protein:  
MPPQKIETGHSDIVHDVVMDYYGKRVATASSDCTVKITGVSNSGGSQQLATLTGHRGPVWQVAWAHPKFDSLLASCSYDGQIIIWKEGNNQNEWTQAHVFNDHKVSVNSIAWAPHELGLSLACGASDGNISVFSARADGGWDTTRIDQAHPVGVTSVSWAPATEPGALVSSGMHEPVYKLASGGCDSTVKVWKFANGSWKMDCFPALHKHKDWVRDVAWAPNLGLPKSTIASGSEDGSVIIWTVGKEGEQWEGKVLKDFKTPVWRVTWSLTGNLLAVSDGNNNVTLWKEAVDGEWEQVTVVEP